Share your work here ✅

Yes we can. Thresholding, polygonizing, & geo-referencing predicted segments will be the focus of a future notebook.

The short version is that I’m following a Slippy Map tile name convention used by OpenStreetMap and other web maps which enables easy conversion from tiles to lat/lon coordinates and back.

For example:

Each image & corresponding mask in my segmentation dataset has a filename that starts like “grid_001_19_319363_270514_…”:

After “grid_001_”, the numbers correspond to {zoom}_{xtile}_{ytile} information. So in this case, we can use the provided num2deg() conversion function to get the NW corner longitude & latitude for this particular time:

# https://wiki.openstreetmap.org/wiki/Slippy_map_tilenames#Python

import math
def num2deg(xtile, ytile, zoom):
    n = 2.0 ** zoom
    lon_deg = xtile / n * 360.0 - 180.0
    lat_rad = math.atan(math.sinh(math.pi * (1 - 2 * ytile / n)))
    lat_deg = math.degrees(lat_rad)
    return (lat_deg, lon_deg)

zoom = 19
xtile = 319363
ytile = 270514

lat, lon = num2deg(xtile, ytile, zoom)
lat, lon
(-5.737609279566592, 39.28916931152344)

Putting this into Google Maps or OpenStreetMap will bring you to that tile’s NW corner location at that zoom level: https://www.openstreetmap.org/#map=19/-5.73761/39.28917

Doing this for all 4 corners of the tile gives you the geo bounds of that tile.

To assign lon/lat coordinates to detected buildings, we have to match up the display (x, y) coordinates of predicted pixels relative to the lon/lat bounds of that tile. This would happen during the polygonizing step. Too much detail to go into that here (and it’s not really specific to deep learning) so stay tuned for that notebook.

If there’s interest, I can also start a new wiki thread for us to share know-how, applications, and new ideas on geospatial deep learning. I’m learning too (aka fumbling my way into making things work) and I’m sure there are many sources of experience & wisdom among us to share and build on!

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That would be great!

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I created a notebook to explore visual representations of embeddings.

https://www.kaggle.com/tamlyn/animating-embedding-space

Using a toy problem I created an embedding layer with three dimensions then animated them on a 3D scatter plot. It’s interesting to see how they gradually move from random positions into some kind of order. I just wish I could keep adding dimensions :hypercube:

Please share if you fork the notebook and do something cool, I think there’s lots more that can be done with this.

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Thanks, feel free to grab the updated HTML templates from the repo for your project :wink:

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Hi, etown

I uploaded the notebook to github: https://github.com/flaviorainhoavila/IEMOCAPspeechEmotionRecognition

I borrowed the audio-spectrogram conversion from https://dzlab.github.io/jekyll/update/2018/11/13/audio-classification/

In order to run the nobeook you’d need to request the data from https://sail.usc.edu/iemocap/

Cheers

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Done! https://forums.fast.ai/t/geospatial-deep-learning-resources-study-group/31044

Could you please wikify that post when you have the chance?

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I’ve belatedly added the training notebook behind my car classifier app http://whatcar.xyz.

The only real trick I used was to sample an equal number of images from each class, and resampling between fits.

Even though I got 80% accuracy in validation, I only got around 50% in the real world. One reason for this is my photos are different to professionally taken photos from the internet (lighting, obstructions, etc), another is that not all cars are equally likely to be seen. Something to keep in mind if your production data is going to be different to your training data.

Hi fellow course-mates and @jeremy ,
Has anyone seen this weird error while running Jeremy’s Collab nb? I updated all of the packages before running the notebook, but it still gives this error.

---------------------------------------------------------------------------
NameError                                 Traceback (most recent call last)
<ipython-input-4-86fc5648604f> in <module>
----> 1 data = CollabDataBunch.from_df(ratings, seed=42)

NameError: name 'CollabDataBunch' is not defined

awesome

Hi @avinashj,
thanks for the compliment! I actually did work a bit further on the project, specifically on the leaves from the category “NaturalBackground” which would be similar to your dataset.
My idea is to use the model I trained on the “SheetAsBackground” data with fastai and apply transfer learning to it, in order to train the model with the “NaturalBackground” images.

This seems not to work out of the box with fast.ai, as there are not 124 classes but instead 51 classes in the new dataset. I found a way to solve this problem with the help of @PierreO, see how it is done here.

I guess you could take my model and use transfer learning with your own dataset. Let me know how it goes!

Thanks for the detailed explanation and the notebook. Yes, that was what I was thinking of.
I along with my friends trying to come up with a model to identify native Indian plants which will be helpful for ecologist working in India.
I’ll post here once I proceed further with my work.
Regards

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@sparalic I think you should simply re-run the cell where you have from fastai.collab import * to import everything in there including CollabDataBunch.

Thank you @bachir, but it seems like my symlinks are all messed up so my nb was not pulling the fastai modules from the correct path. Unfortunately, I went around it using the annoying sys.path.append('../fastai') trick.

I wrote a few words answering the questions “what are pretrained models?” In some sense, I have taken pretrained models for granted to the point where when someone asked me what they were, I miserably stumbled.

I am not sure this can be very useful to anyone taking this course but having been asked the question made me realize that hey, probably for people who have not taken this course or who are not planning to write code but would be interested in learning about the field, this could be quite helpful.

Anyhow, there is also a bit of chewbacca vs yoda classification going on and again I am amazed at how much one can do with the fastai library with so little code!

https://radekosmulski.github.io/answers/html/What%20are%20pretrained%20models%3F.html

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Do you use a plain Jupyter notebook’s HTML as a post? Or does it require some additional rendering libs?

Done.

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I used jupyter nbconvert (it can also convert notebooks to other formats, such as pdf). Here is a bit more information on the exact steps that I took (there is also serving from github pages involved).

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For the object verification problem with new category I have posted last time, I change the technique used from binarizing the last layer to multi variate gaussian anomaly detection and the results is so much better. I have written it here: Object verification with new category added to model

The idea is we can based on the statistic of the features vector to calculate the probability of matching object. The multivariate gaussian anomaly detection is introduced in Andrew Ng course and summarized here: gaussian anomaly detection . I have changed a little bit from the original algorithms that I calculate the logarithm of probability because with high number of variables (128), the results can be too big or too small. Ex: Ex: 48 variables with 0.1 probability for each. The multivariate probability is 0.1⁴⁸ — Very small number

The histogram of probability of number 7 (which have the worst result from last time) and number 9 are below:
Number 7

Number 9:

The probability of number 9 is much higher than number 7 this time. (I don’t know why the probability calculated by multivariate_normal . pdf in python > 1 , but I think the concept is the same so it is not a big deal)

Source code is here: source code

p/s: I haven’t tried the auto-encoder yet. I still think that the classification training will create a better feature vector to differentiate different object

1 Like

I trained a Language Model for arabic on a subset of sentences (I think 100000) from Wikipedia dump. the total dump is around 5GB, I trained on one file of 160MB, I couldn’t do more as even such small dataset collab kernel was on the edge! Also even with such small dataset the training took 3h!!

The result is not that great:

Total time: 2:11:32
epoch  train_loss  valid_loss  accuracy
1      6.494748    6.450583    0.165572  (33:01)
2      5.982694    5.890470    0.187992  (32:54)
3      5.677928    5.628324    0.203663  (33:07)
4      5.383443    5.559011    0.208052  (32:29)

Here is entire steps from downloading the wikipedia dumps to the prediction - link

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I made this a while ago, but didn’t share it with the group because I wanted to spend a bit more time.

Skin Cancer Classifier from:

Unfortunately, the dataset is highly biased. I used the default data augmentation settings + vertical flipping to mitigate these issues. More work can be done here.

nv        67%
mel       11%
bkl       11%
bcc       5%
Other (3) 6%
get_transforms(flip_vert=True)

I had it train overnight (roughly 7 hours) on resnet-50.

End results:

epoch  train_loss  valid_loss  error_rate
496    0.003147    0.519515    0.074888    (00:50)
497    0.000316    0.526893    0.071892    (00:51)
498    0.000188    0.516914    0.071393    (00:51)
499    0.000186    0.522218    0.072391    (00:50)
500    0.000057    0.522059    0.072891    (00:50)

92.7% accuracy, the highest I could find in the kaggle kernels was around 78% accuracy.

You can see the error rates dropping after a while as fit_one_cycle adjusts over time.

skincancer-lr
skincancer-errors

End results confusion matrix:

skincancer-confusion
skincancer-confusion-pts

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