ArrowInvalid: ('Could not convert # with type str: tried to convert to double', 'Conversion failed for column Booking Rep with type category')

(Mohan Raj) #1

Hi Everyone,

I converted my data from object type to categories using,
train_cats(df_raw)

I am writing my df_raw to feather format,
os.makedirs(‘tmp’, exist_ok=True)
feather.write_dataframe(df_raw, ‘test.feather’)

But While writing it to feather format I am facing the below error, I didn’t understand what this error says, anyone please suggest where I made mistake.


ArrowInvalid Traceback (most recent call last)
in ()
1 os.makedirs(‘tmp’, exist_ok=True)
----> 2 feather.write_dataframe(df_raw, ‘test.feather’)

~/anaconda3/lib/python3.6/site-packages/pyarrow/feather.py in write_feather(df, dest)
176 writer = FeatherWriter(dest)
177 try:
–> 178 writer.write(df)
179 except Exception:
180 # Try to make sure the resource is closed

~/anaconda3/lib/python3.6/site-packages/pyarrow/feather.py in write(self, df)
89 # TODO(wesm): Remove this length check, see ARROW-1732
90 if len(df.columns) > 0:
—> 91 batch = RecordBatch.from_pandas(df, preserve_index=False)
92 for i, name in enumerate(batch.schema.names):
93 col = batch[i]

~/anaconda3/lib/python3.6/site-packages/pyarrow/table.pxi in pyarrow.lib.RecordBatch.from_pandas()

~/anaconda3/lib/python3.6/site-packages/pyarrow/pandas_compat.py in dataframe_to_arrays(df, schema, preserve_index, nthreads, columns, safe)
385 arrays = list(executor.map(convert_column,
386 columns_to_convert,
–> 387 convert_types))
388
389 types = [x.type for x in arrays]

~/anaconda3/lib/python3.6/concurrent/futures/_base.py in result_iterator()
584 # Careful not to keep a reference to the popped future
585 if timeout is None:
–> 586 yield fs.pop().result()
587 else:
588 yield fs.pop().result(end_time - time.time())

~/anaconda3/lib/python3.6/concurrent/futures/_base.py in result(self, timeout)
430 raise CancelledError()
431 elif self._state == FINISHED:
–> 432 return self.__get_result()
433 else:
434 raise TimeoutError()

~/anaconda3/lib/python3.6/concurrent/futures/_base.py in __get_result(self)
382 def __get_result(self):
383 if self._exception:
–> 384 raise self._exception
385 else:
386 return self._result

~/anaconda3/lib/python3.6/concurrent/futures/thread.py in run(self)
54
55 try:
—> 56 result = self.fn(*self.args, **self.kwargs)
57 except BaseException as exc:
58 self.future.set_exception(exc)

~/anaconda3/lib/python3.6/site-packages/pyarrow/pandas_compat.py in convert_column(col, ty)
374 e.args += (“Conversion failed for column {0!s} with type {1!s}”
375 .format(col.name, col.dtype),)
–> 376 raise e
377
378 if nthreads == 1:

~/anaconda3/lib/python3.6/site-packages/pyarrow/pandas_compat.py in convert_column(col, ty)
368 def convert_column(col, ty):
369 try:
–> 370 return pa.array(col, type=ty, from_pandas=True, safe=safe)
371 except (pa.ArrowInvalid,
372 pa.ArrowNotImplementedError,

~/anaconda3/lib/python3.6/site-packages/pyarrow/array.pxi in pyarrow.lib.array()

~/anaconda3/lib/python3.6/site-packages/pyarrow/array.pxi in pyarrow.lib.DictionaryArray.from_arrays()

~/anaconda3/lib/python3.6/site-packages/pyarrow/array.pxi in pyarrow.lib.array()

~/anaconda3/lib/python3.6/site-packages/pyarrow/array.pxi in pyarrow.lib._ndarray_to_array()

~/anaconda3/lib/python3.6/site-packages/pyarrow/error.pxi in pyarrow.lib.check_status()

ArrowInvalid: (‘Could not convert # with type str: tried to convert to double’, ‘Conversion failed for column Booking Rep with type category’)’

Thanks

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#2

I also had this issue, but I dont yet have an answer. In my case the column is called Statute and when I check the dtype, the dtype is a catagory.

EDIT: When I type df_raw.Statute.cat.codes, I get a list of codes as expected which are apparently dtype int16:

1085 36
1086 35
1087 36
Length: 1088, dtype: int16

…so no idea why it cant write that to a feather

I think it might maybe be due to having a special char, in this case a “.” and in @OP’s case a “#”

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(Tim Jones) #3

I have been trying to recreate the notebook in lesson 1 from scratch and also get an Arrow invalid error after using train_cats(df_raw) then trying to save to feather format. Did you guys manage to solve this?

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(Kumar Suraj) #4

That’s because we are not converting all of the categorical columns to their codes.
We can do that by changing all of the categories columns to their respective codes by putting them in a loop.

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