I tried to do so installing the package via terminal and then typing “jt -t grade3” but the appeareance of my jupyter notbook did not change (also after a refresh)…
Hi,
You can check this gist: https://gist.github.com/kijes/163bbceca3b6fb25f210f1d2033a4f97
I’ve refactored the code since the last post. Generally the preparation is a separate step and then I use its output as input to training phase.
In the gist:
I call “prepare_train_full_fh_cmd.sh” to run FH command to prepare the data
The script calls another one “prepare_train_full_fh.sh” which just calls python script “prepare_train_full_fh.py”
“prepare_train_full_fh.py” downloads and unpack data from Google Drive into “/output” (you need to provide file id that you can get when you share your file)
I download everythin that’s is needed for the experiment: training data, test data or pretrained models.
You will need to adjust the paths.
Thank you for your post.
You mentioned earlier that you had a shareable google drive link to the lung data.
I was wondering by any chance if you would be willing to share the link? I have had trouble being able to download the data and no space on my personal computers.